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Series GSE135775 Query DataSets for GSE135775
Status Public on Nov 04, 2019
Title Gene expression analysis of mesenchymal stem cells at different stages of differentiation in to adipocytes
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Mechanisms involved in adipose tissue expansion is of great interest in development of obesity and associated metabolic complications. Mesenchymal stem cell (MSC) differentiation in to adipocytes provides a model system to understand various gene expression pattern involved at different stages of adipogenesis. In this project we used bulk RNASeq to identify the genes that are selectively expressed at 3 different time points of adipocyte differentaition from MSCs.
 
Overall design Gene expression profiling of MSCs at three different time points during in vitro differentiation in to adipocytes using bulk RNASeq.
 
Contributor(s) Vijay J, Grundberg E
Citation(s) 32066997
Submission date Aug 13, 2019
Last update date Mar 14, 2021
Contact name Elin Grundberg
Organization name CHILDREN'S MERCY HOSP (KANSAS CITY, MO)
Street address 2401 Gillham Road
City Kansas City
State/province Missouri
ZIP/Postal code 64108
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (81)
GSM4029695 MSC70_AD1_RNASeq_1_4276_1
GSM4029696 MSC77_ACI_RNASeq_1_4276_2
GSM4029697 MSC77_AC2_RNASeq_1_4276_3
This SubSeries is part of SuperSeries:
GSE136230 Single-cell analysis of human adipose tissue
Relations
BioProject PRJNA560041
SRA SRP218229

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135775_matrixRPKM_MSC.txt.gz 2.8 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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