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Series GSE135620 Query DataSets for GSE135620
Status Public on Nov 13, 2020
Title Meninges from mice with different microbiomes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA was extracted from the meninges of mice from either Specific pathogen free or Germ free facilities or from the offspring of mice reconstituted with different human microbiomes.
 
Overall design 4 groups:
Specific Pathogen Free
Germ Free
Donor 3
Donor 7
 
Contributor(s) Ferdinand JR, Fitzpatrick Z, Lawley T, Clare S, Clatworthy MR
Citation(s) 33149302
Submission date Aug 09, 2019
Last update date Nov 20, 2020
Contact name John Robert Ferdinand
Organization name University of Cambridge
Street address Department of Medicine
City Cambridge
ZIP/Postal code CB2 0QH
Country United Kingdom
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (12)
GSM4023593 1: SPF_1
GSM4023594 2: SPF_2
GSM4023595 3: SPF_3
Relations
BioProject PRJNA559469
SRA SRP217908

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135620_Counttable.csv.gz 721.5 Kb (ftp)(http) CSV
GSE135620_Normcounts.csv.gz 2.0 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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