NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE135552 Query DataSets for GSE135552
Status Public on Jan 17, 2020
Title The Influence of Met Receptor Level on HGF-Induced Glycolytic Reprogramming in Head and Neck Squamous Cell Carcinoma
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Head and neck squamous cell carcinomas (HNSCC) are known to overexpress a variety of receptor tyrosine kinases, such as the HGF receptor Met. Like other malignancies, there is a mutual interaction between the tumor cells and surrounding tissues and cells. We hypothesized that activation of HGF/Met signaling in HNSCC might influence glucose metabolism and therefore substantially changes the tumor microenvironment. To determine the effect of HGF, we used three established HNSCC cell lines and flow cytometry, western blot and RNA sequencing. Dynamic changes in glucose metabolism were measured real-time by an Extracellular flux analyzer. As expected, the cell lines exhibited different levels of Met and responded differently to HGF stimulation. As confirmed by RNA sequencing, the level of Met expression is associated with the number of upregulated HGF-dependent genes. Overall, Met stimulation by HGF leads to increased glycolysis, presumably mediated by higher expression of three key enzymes of glycolysis. These effects appear to be stronger in Methigh expressing HNSCC cells. Collectively our data supports the hypothesized role of HGF/Met signaling in metabolic reprogramming of HNSCC.
 
Overall design 3 cell lines, of each one an untreated control and one sample treated with 50 ng/ml HGF for 48 hours, 3 replicates
 
Contributor(s) Boschert V, Bischler T, Hartmann S
Citation(s) 31940827, 33233528, 39000441
Submission date Aug 08, 2019
Last update date Aug 08, 2024
Contact name Tom Gräfenhan
E-mail(s) ht-seq.sysmed@uni-wuerzburg.de
Phone +49 - 931 - 31 - 80814
Organization name University of Wuerzburg
Department Core Unit SysMed
Lab Raum D15.02.045
Street address Josef-Schneider-Str. 2, Bau D15
City Würzburg
ZIP/Postal code 97080
Country Germany
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (18)
GSM4017093 Detroit Control 1
GSM4017094 Detroit HGF 1
GSM4017095 FaDu Control 1
Relations
BioProject PRJNA559273
SRA SRP217801

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135552_Raw_count_table.csv.gz 1.2 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap