|
| Status |
Public on Jul 30, 2020 |
| Title |
Identification of BMP-regulated genes in early gastrulation stage zebrafish embryos |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report the systematic identification of BMP (bone morphogenetic protein) target genes in zebrafish during dorsal-ventral patterning using RNA-sequencing.
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| |
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| Overall design |
Transcript levels in shield-stage zebrafish embryos overexpressing bmp or the BMP inhibitor chordin (chd) were compared to transcript levels in uninjected embryos using RNA-sequencing. Three repeats containing 10 embryos each were analyzed per condition.
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| |
|
| Contributor(s) |
Rogers KW, Müller P |
| Citation(s) |
33174840 |
| |
| Submission date |
Jul 30, 2019 |
| Last update date |
Nov 16, 2020 |
| Contact name |
Katherine Wallace Rogers |
| E-mail(s) |
katherine.rogers@tuebingen.mpg.de
|
| Organization name |
Friedrich Miescher Laboratory of the Max Planck Society
|
| Lab |
Systems Biology of Development
|
| Street address |
Max-Planck-Ring 9
|
| City |
Tübingen |
| ZIP/Postal code |
72076 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL20828 |
Illumina NextSeq 500 (Danio rerio) |
|
| Samples (9)
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|
| Relations |
| BioProject |
PRJNA557436 |
| SRA |
SRP216836 |
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