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Series GSE134876 Query DataSets for GSE134876
Status Public on Sep 22, 2020
Title Reciprocal regulation of EGR1 and EZH2 in breast cancer cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We found that EGR1 stimulates the expression of EZH2, which in turn inhibited the expression of EGR1 through a silencer region and deletion of the silencer resulted in upregulation of EGR1, which reduced the malignancy of breast cancer cells.
 
Overall design RNA sequencing of MDA-MB-231 and MCF-7 with wildtype and silencer knockout. Two clones of silencer knockout were included.
 
Contributor(s) Guan X, Choi UL, Li G
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 25, 2019
Last update date Sep 23, 2020
Contact name Gang Li
E-mail(s) gangli@um.edu.mo
Organization name University of Macau
Department Faculty of Health Sciences
Lab Gang Li's Lab
Street address Avenida da Universidade, Taipa
City Macau
ZIP/Postal code 999078
Country Macau
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (8)
GSM3974785 MCF-7_WT_Rep1
GSM3974786 MCF-7_WT_Rep2
GSM3974787 MCF-7_Silencer-KO_Clone1
Relations
BioProject PRJNA556677
SRA SRP216394

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE134876_MCF-7_WT_vs_Silencer-KO_Gene_RawCount_RefSeq.txt.gz 333.8 Kb (ftp)(http) TXT
GSE134876_MDA-MB-231_WT_vs_Silencer-KO_Gene_RawCount_RefSeq.txt.gz 334.6 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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