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Series GSE134488 Query DataSets for GSE134488
Status Public on Feb 24, 2020
Title Transcriptomic analysis of the soleus muscle extracted from Dnm2 K562E point-mutant heterozygous mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA sequencing was performed to evaluate the impact of Dnm2 K562E mutation in the soleus muscle. The assessment of the dataset reveals a large number of differentially regulated transcripts between animals of both genotypes. This is consistent with a dominant phenotype caused by the Dnm2 K562E point mutation on the muscle.
 
Overall design The dataset includes sequenced RNA extracted from soleus muscle of mice aged to 2 months. Soleus muscles were obtained from 4 independent male mice per genotype. The genotypes analyzed include controls (Dnm2+/+) and Dnm2 K562E point-mutant mice (Dnm2 +/K562E).
 
Contributor(s) Pereira JA, Gerber J, Gerber D, Suter U
Citation(s) 32129442
Submission date Jul 18, 2019
Last update date May 26, 2020
Contact name Jorge A. Pereira
E-mail(s) jorgea@ethz.ch
Phone +41446333307
Organization name ETH Zurich
Department Dep. of Biology
Lab IMHS F25.2 - Suter Lab
Street address Otto-Stern-Weg 7
City Zurich
ZIP/Postal code 8093
Country Switzerland
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (8)
GSM3953328 Soleus muscle from control mouse 1
GSM3953329 Soleus muscle from control mouse 2
GSM3953330 Soleus muscle from control mouse 3
Relations
BioProject PRJNA555329
SRA SRP215262

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE134488_RAW.tar 900.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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