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Series GSE134412 Query DataSets for GSE134412
Status Public on Jul 18, 2019
Title Siah2 control on tumor environment
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Understanding mechanisms underlying anti-tumor immunity is pivotal for improving immune-based cancer therapies. Here we demonstrate that growth of inoculated BRAF mutant melanoma cells was inhibited in Siah2-/- mice, up to a complete loss. Melanoma grown in Siah2-/- mice exhibited increased proinflammatory immune components, signified by enhanced intra-tumoral activated T cells, along with decreased expression of Ccl17 and Ccl22, and decreased Foxp3 expression. A marked reduction in Treg proliferation was associated with inhibition of Treg cell cycle progression. Correspondingly, G1 cell cycle arrest in Siah2-/- Tregs coincided with elevated expression of the cyclin dependent kinase inhibitor p27, a Siah2 substrate. Growth of PD1-unresponsive melanoma was effectively inhibited up to complete tumor rejection in Siah2-/- mice subjected to PD1 blockade, highlighting synergy between PD1 inhibition and Siah2 loss. Siah2 regulation of Treg recruitment and cell cycle progression effectively controls melanoma development and confers synthetic lethality when combined with anti-PD1 therapy.
 
Overall design 5 melanoma tumors grown in WT mice and 5 melanoma tumors grown in siah2 knock out mice were analyzed
 
Contributor(s) Scortegagna M, Zhang T, Brian J, Ronai ZA
Citation(s) 31911617
Submission date Jul 17, 2019
Last update date Jan 13, 2020
Contact name Brian Patrick James
E-mail(s) bjames@sanfordburnham.org
Organization name Sanford Burnham Prebys Medical Discovery Institute
Department Genomics
Lab James
Street address 10901 North Torrey Pines Road
City San Diego
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (10)
GSM3946156 MS_01_WT2
GSM3946157 MS_02_WT3
GSM3946158 MS_03_WT4
Relations
BioProject PRJNA555115
SRA SRP215249

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Supplementary file Size Download File type/resource
GSE134412_processed_data_matrix.xlsx 1.4 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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