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| Status |
Public on Jan 16, 2024 |
| Title |
Proteome-wide profiling of Transcriptional Machinery on Accessible Chromatin by biotinylated transposon (various cell lines I) |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Other
|
| Summary |
This study introduced a method for directly identifying the transcriptional machinery on accessible chromatin (ATAC-MS) in a proteome scale. The goals of this study are to integrate ATAC-seq with ATAC-MS to investigate the real-time in vivo transcriptional regulatory processes in organisms.
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| Overall design |
ATAC-seq was applied to identify changes in chromatin accessibility and transcription factors binding motifs in HeLa cells treated with TNFα, MCF7 treated with E2/4HT and C2C12 during differentiation.
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| Contributor(s) |
Ding C, Zhang H |
| Citation(s) |
34678055 |
| |
| Submission date |
Jul 10, 2019 |
| Last update date |
Jan 17, 2024 |
| Contact name |
Haizhu Zhang |
| E-mail(s) |
zhz2230@qq.com
|
| Phone |
18621062295
|
| Organization name |
Fudan University
|
| Department |
Institutes of Biomedical Sciences
|
| Lab |
He Fuchu Lab
|
| Street address |
No. 131 Dong'an Road, Xuhui District
|
| City |
Shanghai |
| ZIP/Postal code |
200032 |
| Country |
China |
| |
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| Platforms (2) |
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| Samples (12)
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| This SubSeries is part of SuperSeries: |
| GSE174643 |
Proteome-wide profiling of Transcriptional Machinery on Accessible Chromatin by biotinylated transposon |
|
| Relations |
| BioProject |
PRJNA553754 |
| SRA |
SRP214100 |
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