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Series GSE134054 Query DataSets for GSE134054
Status Public on Dec 23, 2019
Title Endogenous topoisomerase II-mediated DNA breaks drive thymic cancer predisposition linked to ATM deficiency
Organism Mus musculus
Experiment type Genome variation profiling by genome tiling array
Summary Copy-number variation by Comparative Genomic Hybridization (CGH) on thymocytes and Kidney (control) of Tdp2+/+Atm-/- and Tdp2-/-Atm-/- mice.
 
Overall design 6 independent experiments of Tdp2+/+Atm-/- mice and 3 independent experiments of Tdp2-/-Atm-/ mice.
 
Contributor(s) Álvarez-Quilón A, Terrón-Bautista J, Delgado-Sainz I, Serrano-Benítez A, Romero-Granados R, Martínez-García PM, Bernal-Lozano C, Quintero C, García-Quintanilla L, Cortés-Ledesma F
Citation(s) 32060399
Submission date Jul 09, 2019
Last update date Mar 02, 2020
Contact name Felipe Cortés Ledesma
E-mail(s) fcortes@cnio.es
Organization name CNIO
Department Molecular Oncology
Lab Topology and DNA breaks
Street address Melchor Fernández Almagro 3
City Madrid
State/province Madrid
ZIP/Postal code 28029
Country Spain
 
Platforms (1)
GPL4094 Agilent-014699 Mouse Genome CGH Microarray 105A (G4416A)
Samples (9)
GSM3934872 CGH Tdp2-/-Atm-/- Exp1
GSM3934873 CGH Tdp2-/-Atm-/- Exp2
GSM3934874 CGH Tdp2-/-Atm-/- Exp3
Relations
BioProject PRJNA553571

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE134054_RAW.tar 139.5 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table
Processed data provided as supplementary file

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