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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jul 25, 2019 |
| Title |
RNA-Seq profiling of BIN1 knock-out mouse microglia cells |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Experimental Questions: Does knocking out BIN1 have an effect on gene expression in microglia cells? Does BIN1 expression have a different effect in males vs. females?
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| Overall design |
Thirty samples were analyzed, with 4 to 6 replicates per group. Male and Females for BIN1_WT, BIN1_Het, and BIN1_Homo mice.
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| Contributor(s) |
Crotti A, Sait HR, McAvoy KM, Estrada K, Ergun A, Szak S, Marsh G, Jandreski L, Peterson M, Reynolds TL, Dalkilic-Liddle I, Cameron A, Cahir-McFarland E, Ransohoff RM |
| Citation(s) |
31263146 |
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| Submission date |
Jun 17, 2019 |
| Last update date |
Jul 25, 2019 |
| Contact name |
Suzanne Szak |
| Organization name |
BiogenIdec, Inc.
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| Department |
Drug Discovery
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| Street address |
14 Cambridge Ctr
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| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02142 |
| Country |
USA |
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| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
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| Samples (30)
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| Relations |
| BioProject |
PRJNA549308 |
| SRA |
SRP201679 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE132877_FPKM.txt.gz |
2.3 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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