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Series GSE132839 Query DataSets for GSE132839
Status Public on Jun 18, 2019
Title Gene expression-based, through the hybridization of microbial DNA onto the designed probes on microarrys, i.e., GeoChip
Platform organisms Bacteria; Archaea; Eukaryota
Sample organisms soil metagenome; compost metagenome; manure metagenome
Experiment type Other
Summary A total of 81515 genes belonging to 31 gene categories were detected in a total of 80 samples
 
Overall design In the study presented here, microbial functional genes in manure, compost, compost-amended soil and control agricultral soil were detected by GeoChip 5.0 to acquire gene expression profiles profiles of a total of 8,644 unique genes, leading to the successful construction of supervised
 
Contributor(s) Zhou J, Gao Q, Zhou X
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 17, 2019
Last update date Jun 18, 2019
Contact name Qun Gao
E-mail(s) gao-q14@mails.tsinghua.edu.cn
Organization name Tsinghua University
Department Environmental sicence and engineering
Street address Shuang Qing Road
City Beijing
State/province Beijing
ZIP/Postal code 100084
Country China
 
Platforms (1)
GPL26791 GeoChip 5.0
Samples (79)
GSM3893640 Manure in livestock HZ replicate1
GSM3893641 Compost-amended soil in livestock JG replicate1
GSM3893642 Manure in livestock ZZ replicate2
Relations
BioProject PRJNA549260

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE132839_GeoChip_5.0_raw_data.txt.gz 21.8 Mb (ftp)(http) TXT
Processed data included within Sample table
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