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Series GSE132681 Query DataSets for GSE132681
Status Public on Dec 29, 2021
Title Loss of ATF4 leads to functional aging-like attrition of adult hematopoietic stem cells [ChIP-seq]
Organisms Homo sapiens; Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Human acute myeloid leukemia (AML) KG1a cells or mouse BM cells (mouse bone morrow cells were employed for each ChIP assay. The ChIP procedure was performed according to a previously described protocol (Lee et al., 2006; Ying et al., 2017), using anti-ATF4 antibody (Abcam)
Overall design ChIP-sequencing (ChIP-seq) of ATF4 in human AML KG1a cells and mouse BM cells. Input samples included.
Contributor(s) Sun Y, Li M
Citation(s) 34936448
Submission date Jun 13, 2019
Last update date Dec 30, 2021
Contact name Yan Sun
Organization name Sun Yat-sen University
Street address Zhong shan 2nd Road, Building 74
City Guangzhou
State/province Guangdong
ZIP/Postal code 510080
Country China
Platforms (2)
GPL20795 HiSeq X Ten (Homo sapiens)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (4)
GSM3886349 KG1a_ATF4_chip
GSM3886350 KG1a_ATF4_input
GSM3886351 Mouse_BM_ATF4_CHIP
This SubSeries is part of SuperSeries:
GSE132683 Loss of ATF4 leads to functional aging-like attrition of adult hematopoietic stem cells
BioProject PRJNA548750
SRA SRP201332

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE132681_KG1a_ATF4_chip_vs_KG1a_input_peaks.bed.gz 8.4 Kb (ftp)(http) BED
GSE132681_Mouse_BM_ATF4_CHIP-2_vs_input_2_peaks.bed.gz 755.4 Kb (ftp)(http) BED
GSE132681_RAW.tar 387.2 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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