NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE130780 Query DataSets for GSE130780
Status Public on Apr 16, 2020
Title Telomere dysfunction cooperates with epigenetic alterations to impair murine embryonic stem cell fate commitment
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary This study demonstrates a specific cooperativity between perturbations in histone methylation and eroded telomeres to destabilize the differentiation of murine embryonic stem cells.
 
Overall design Murine embryonic stem cells of two different genotypes (WT or Tert-/-) were subjected to differentiation, and treated with compounds that modulated histone H3K27 tri-methylation to assess their impact upon the differentiation response
 
Contributor(s) Criqui M, Qamra A, Chu T, Sharma M, Tsao J, Henry DA, Barsyte-Lovejoy D, Arrowsmith CH, Winegarden N, Lupien M, Harrington L
Citation(s) 32297856
https://elifesciences.org/articles/47333
Submission date May 06, 2019
Last update date May 12, 2020
Contact name Lea Harrington
Organization name University of Montreal
Department Department of Medicine
Lab Institute for Research in Immunology and Cancer
Street address 2950 chemin de Polytechnique, Pavillon Marcelle-Coutu
City Montreal
State/province Quebec
ZIP/Postal code H3T1J4
Country Canada
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (56)
GSM3753445 180222_KO_2DL_undifferentiated_S6
GSM3753446 180419_KO_2DL_undifferentiated_S2
GSM3753447 181002_KO_2DL_undifferentiated_S3
Relations
BioProject PRJNA541428
SRA SRP195732

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130780_RAW.tar 26.7 Gb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap