NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE129489 Query DataSets for GSE129489
Status Public on Jul 31, 2019
Title Pro-survival Lipid Sphingosine-1-Phosphate Metabolically Reprograms T cell to Limit its Anti-Tumor Activity
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Sphingosine 1-phosphate (S1P), a pro-tumor survival bioactive lysophospholipid, generated by sphingosine kinase 1 (SphK1), regulates lymphocyte egress into circulation via transducing S1P receptor 1 (S1PR1) signalling, and also plays a role in the differentiation of regulatory T cells and T helper-17 cells. However, the mechanisms by which receptor-independent SphK1/S1P signallng regulates anti-tumor T cell activity remain unknown. Using melanoma antigen gp100 reactive T cells deficient in Sphk1, we found that Pmel-Sphk1-/- T cells maintained central memory phenotype, showed higher mitochondrial respiration, and exhibited resistance to TGF-β mediated suppression. Mechanistically, we discovered a direct correlation between SphK1 generated intracellular S1P and PPARγ (peroxisome proliferator-activated receptor gamma) activity, which in turn regulate lipolysis in T cells. Genetic, molecular or pharmacologic inhibition of SphK1 or PPARγ improved metabolic fitness and anti-tumor activity of T cells. Further, inhibition of SphK1 and PD1 together led to long-term control of melanoma. Overall, these data highlight the clinical potential of targeting SphK1/S1P for improved anti-cancer adoptive T cell immunotherapy.
 
Overall design Duplicate samples were analyzed from the WT and Sphingosine Kinase deficient mouse. The splenic T cells were activated wih cognate antigen (gp100) for three days before the RNA was prepared and RNA seq. performed.
 
Contributor(s) Mehrotra S, Zilliox M
Citation(s) 31412253
Submission date Apr 08, 2019
Last update date Dec 10, 2019
Contact name Michael J Zilliox
E-mail(s) mizilliox@luc.edu
Organization name Loyola University Chicago
Department Ophthalmology
Street address 2160 S. First Ave
City Maywood
State/province IL
ZIP/Postal code 60559
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (4)
GSM3714326 WT control 1
GSM3714327 WT control 2
GSM3714328 SphK1 -/- 1
Relations
BioProject PRJNA531482
SRA SRP191448

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE129489_SphK1_KO_vs_control.xlsx 880.1 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap