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Series GSE129293 Query DataSets for GSE129293
Status Public on Jun 17, 2021
Title Regulation of hypoxia-inducible factor activity by CHD4
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary CHD4 coactivates a subset of HIF target genes in breast cancer MDA-MB-231 cells.
 
Overall design MDA-MB-231 cells were exposed to 20% or 1% O2 for 24 hrs and subjected to mRNA-seq.
 
Contributor(s) Chen Y, Luo W
Citation(s) 32699137
Submission date Apr 03, 2019
Last update date Jun 17, 2021
Contact name Weibo Luo
E-mail(s) weibo.luo@utsouthwestern.edu
Phone 214-645-4770
Organization name UT Southwestern Medical Center
Department Pathology
Street address 5323 Harry Hines Blvd.
City Dallas
State/province Texas
ZIP/Postal code 75390-9072
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (8)
GSM3704153 shCHD4_1%_1
GSM3704154 shCHD4_1%_2
GSM3704155 shSC_1%_1
Relations
BioProject PRJNA530760
SRA SRP190500

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE129293_DifferentialExpression_FPKM.txt.gz 733.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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