|
| Status |
Public on Aug 21, 2019 |
| Title |
Endogenous RNAi pathway evolutionarily shapes the destiny of the antisense lncRNA transcriptome |
| Organism |
Naumovozyma castellii |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
31462400 |
| |
| Submission date |
Apr 02, 2019 |
| Last update date |
Aug 30, 2019 |
| Contact name |
Maxime Wery |
| E-mail(s) |
maxime.wery@curie.fr
|
| Organization name |
Institut Curie
|
| Department |
UMR3244
|
| Lab |
Non-coding RNA, epigenetics and genome fluidity
|
| Street address |
26 rue d'Ulm
|
| City |
Paris |
| ZIP/Postal code |
75005 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL25506 |
Illumina HiSeq 2500 (Naumovozyma castellii) |
|
| Samples (17)
|
| GSM3703253 |
WT biological replicate 1 (total RNA-seq) |
| GSM3703254 |
WT biological replicate 2 (total RNA-seq) |
| GSM3703255 |
dcr1 biological replicate 1 (total RNA-seq) |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE90041 |
Total RNA-Seq in wild-type (WT), dcr1, xrn1 and xrn1 dcr1 strains of N. castellii |
| GSE129232 |
Dicer-dependent small RNAs production from antisense long non-coding RNAs in N. castellii |
| GSE129269 |
Dcr1-GFP is functional for 22-23 nt small RNAs production |
|
| Relations |
| BioProject |
PRJNA530561 |
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