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GEO accession:
Series GSE128922
Query DataSets for GSE128922
Status
Public on Jan 13, 2020
Title
Digital gene expression of directed differenciation protocols
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Summary
Lung and hindgut directed differentiations with multiple protocols and time points
Overall design
Comprehensive characterization at several time points of iPSC directed differenciation protocols
Contributor(s)
Villacorta Martin C
,
Mithal A
,
Mostoslavsky G
Citation(s)
31924806
,
32577635
Submission date
Mar 27, 2019
Last update date
Jun 29, 2020
Contact name
Carlos Villacorta-Martin
Organization name
Center for Regenerative Medicine at Boston University
Street address
670 Albany St
City
Boston
State/province
MA
ZIP/Postal code
02118
Country
USA
Platforms (1)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
Samples (36)
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GSM3688350
Day 3 (DE) [B10]
GSM3688351
Day 6 (DS/SB) [B11]
GSM3688352
Day 6 (DS/SB) [B12]
GSM3688360
Day 3 (DE) [B9]
GSM3688361
Day 8 (CBRA) [C1]
GSM3688363
Day 14 (GFP+) [C11]
GSM3688364
Day 14 (GFP+) [C12]
GSM3688365
Day 8 (CBRA) [C2]
GSM3688373
Day 30 (GFP- CD47+) CK+DCI [D1]
GSM3688377
Day 30 (GFP- CD47+) CK+DCI [D2]
GSM3688378
Day 30 (GFP- CD47+) BMP2IM [D3]
GSM3688379
Day 30 (GFP- CD47+) BMP2IM [D4]
GSM3688380
Day 30 (GFP- CD47+) IM [D5]
GSM3688381
Day 30 (GFP- CD47+) IM [D6]
GSM3688382
Day 30 (GFP- CD47-) IM [D7]
GSM3688383
Day 30 (GFP- CD47-) IM [D8]
GSM3688397
Hindgut Day 8 (GFP+ive) [F1]
GSM3688398
Day 42 (GFP- CD47+) CK+DCI [F10]
GSM3688401
Hindgut Day 8 (GFP+ive) [F2]
GSM3688402
Day 42 (GFP+ CD47-) CK+DCI [F3]
GSM3688403
Day 42 (GFP+ CD47-) CK+DCI [F4]
GSM3688404
Day 42 (GFP+ CD47-) BMP2 IM [F5]
GSM3688405
Day 42 (GFP+ CD47-) BMP2 IM [F6]
GSM3688406
Day 42 (GFP+ CD47-) IM [F7]
GSM3688407
Day 42 (GFP+ CD47-) IM [F8]
GSM3688408
Day 42 (GFP- CD47+) CK+DCI [F9]
GSM3688422
Hindgut (1:3) Day 16 IM [H10]
GSM3688423
Hindgut (GFP+ive) Day 16 CK+DCI [H11]
GSM3688424
Hindgut (GFP+ive) Day 16 CK+DCI [H12]
GSM3688426
Hindgut Day 16 CK+DCI [H3]
GSM3688427
Hindgut Day 16 CK+DCI [H4]
GSM3688428
Hindgut Day 16 IM [H5]
GSM3688429
Hindgut Day 16 IM [H6]
GSM3688430
Hindgut (1:3) Day 16 CK+DCI [H7]
GSM3688431
Hindgut (1:3) Day 16 CK+DCI [H8]
GSM3688432
Hindgut (1:3) Day 16 IM [H9]
Relations
BioProject
PRJNA529376
SRA
SRP189589
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE128922_RAW.tar
194.3 Mb
(http)
(custom)
TAR (of TXT)
SRA Run Selector
Raw data are available in SRA
Processed data provided as supplementary file
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