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Series GSE128037 Query DataSets for GSE128037
Status Public on Jan 01, 2020
Title Tumor initiation: oncogenes as mechanical signals
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq of human breast epithelial cells (MCF10A) seeded on substrates of different stiffness.
 
Overall design MCF10-A cells transduced with Empty vector of HER2-CA were transfected with siRNAs and replated after 24 hr on plastic or 0.5 kPa PAAm hydrogles. Samples were harvested 24 hr later.
 
Contributor(s) Forcato M, Bicciato S, Panciera T, Citron A, Cordenonsi M, Piccolo S
Citation(s) 32066931
Submission date Mar 08, 2019
Last update date Feb 20, 2020
Contact name Silvio Bicciato
E-mail(s) silvio.bicciato@unipd.it
Phone +39-049-827-6108
Organization name University of Padova
Department Molecular Medicine
Street address via U. Bassi 59/b
City Padova
ZIP/Postal code 35131
Country Italy
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (9)
GSM3660722 MCF10A_empty_plastic_siAS_repA
GSM3660723 MCF10A_empty_plastic_siAS_repB
GSM3660724 MCF10A_empty_plastic_siYT1
Relations
BioProject PRJNA526145
SRA SRP187939

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE128037_RNAseq_experiment1_expressionMatrix_counts.xlsx 1.5 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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