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Series GSE126162 Query DataSets for GSE126162
Status Public on Aug 05, 2019
Title RNA sequencing for RWPE1 cells, OLFM4-Active RWPE1 cells and OLFM4-KO RWPE1 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary OLFM4 gene expressing in RWPE1 stem/progenitor-like cells. To study OLFM4 gene functions and molecular mechanisms, we generated OLFM4-avtive and OLFM4-knock out-GFP reporter RWPE1 cells with CRISP-Cas 9 system. The cell transcriptome was studied with RNA sequencing.
 
Overall design Comparision of gene expressing signature between OLFM4-knock out RWPE1 and OLFM4-wild RWPE1 cells; OLFM4-Active RWPE1 cells and OLFM4-wild RWPE1 cells.
 
Contributor(s) Pirooznia M
Citation(s) 33318499
Submission date Feb 06, 2019
Last update date Dec 18, 2020
Contact name Mehdi Pirooznia
E-mail(s) pirooznia@gmail.com
Phone 410-340-6052
Organization name National Institutes of Health
Street address 12 SOUTH DR
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (3)
GSM3592468 OLFM4-wild RWPE1 cells
GSM3592469 OLFM4-Knock out-RWPE1 cells
GSM3592470 OLFM4-Active RWPE1 cells
Relations
BioProject PRJNA521171
SRA SRP184225

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126162_Gene_count.txt.gz 349.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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