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Series GSE125905 Query DataSets for GSE125905
Status Public on Mar 18, 2019
Title Reassessment of Exosome Composition
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary RNA-Seq of cellular and extracellular samples from DKO-1 and Gli36 cell lines. The distribution of extracellular RNA between microvesicles, and crude small extracellular vesicular vesicles fractionated based on flotation density in ioxdixanol is distinct between the different extracellular compartments.
 
Overall design The extracellular release of RNA from two human cancer cells lines is examined based on separation of the samples into distinct extracellular compartments.
 
Contributor(s) Jeppesen DK, Coffey RJ
Citation(s) 30951670
Submission date Jan 30, 2019
Last update date Jun 18, 2019
Contact name Jie Ping
Organization name Vanderbilt University Medical Center
Street address 2525 West End Ave
City Nashville
State/province TN
ZIP/Postal code 37203
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (42)
GSM3584509 DKO1_Exo_Cell_RNA_1
GSM3584510 DKO1_Exo_Cell_RNA_2
GSM3584511 DKO1_Exo_Cell_RNA_3
Relations
BioProject PRJNA517926
SRA SRP182943

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125905_Dennis_RNASeq_gene_countdata.txt.gz 1.2 Mb (ftp)(http) TXT
GSE125905_Dennis_smallRNASeq_miRNA_countdata.txt.gz 68.5 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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