|
| Status |
Public on Apr 30, 2019 |
| Title |
Non-coding and coding transcriptional profiles are significantly altered in pediatric Retinoblastoma tumors |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To find out the transcriptomic signature of Retinoblastoma compared to adult Retina. The methadology used was RNA sequencing using Illumina Platform.
|
| |
|
| Overall design |
This is the first transcriptomic report on RB tumours from patients compared to retina. This experiment gives valuable information about gene expression fusions and Long Non-coding RNAs and RNA mutations
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| |
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| Contributor(s) |
Dotts K, Nagaraghan L, Rajasekaran S, Kumar R, Rishi P, Khetan V, Sivaraman K, Subramanyan K, Sahoo D, Campbell M, Elchuri SV, Owen Miles W |
| Citation(s) |
31058073 |
| |
| Submission date |
Jan 30, 2019 |
| Last update date |
Aug 21, 2020 |
| Contact name |
Debashis Sahoo |
| E-mail(s) |
dsahoo@ucsd.edu
|
| Phone |
6508624736
|
| Organization name |
UCSD
|
| Department |
Pediatrics
|
| Lab |
Boolean
|
| Street address |
9500 Gillman Drive
|
| City |
La Jolla |
| State/province |
California |
| ZIP/Postal code |
92093 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (10)
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|
| Relations |
| BioProject |
PRJNA517916 |
| SRA |
SRP182935 |
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