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Series GSE125842 Query DataSets for GSE125842
Status Public on Dec 17, 2019
Title A minimal DNA sequence within the ARF promoter represses p16INK4A expression via long-range chromatin interaction
Organism Homo sapiens
Experiment type Other
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 31818950
Submission date Jan 29, 2019
Last update date Dec 17, 2019
Contact name Chunliang Li
E-mail(s) Chunliang.Li@STJUDE.ORG
Organization name St.Jude Children's Research Hospital
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (19)
GSM3579849 CDKN2A wide type bait1
GSM3579850 CDKN2A wide type bait2
GSM3579851 CDKN2A ARF KRAB block type bait1-2
This SuperSeries is composed of the following SubSeries:
GSE125666 A minimal DNA sequence within the ARF promoter represses p16INK4A expression via long-range chromatin interaction [Capture-C]
GSE125841 A minimal DNA sequence within the ARF promoter represses p16INK4A expression via long-range chromatin interaction [Cut&Run ChiP-seq]
Relations
BioProject PRJNA517696

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125842_RAW.tar 765.6 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp

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