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Series GSE125719 Query DataSets for GSE125719
Status Public on Jan 26, 2020
Title Transcriptomic analysis of LSD1i-sensitive and resistant AML cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study is to identify the molecular mechanisms underlying the resistance/sensitivity of AML cells to lysine specific demethylase 1 (LSD1) inhibitor.
 
Overall design We performed the transcriptomic analysis at the earliest detected and last tested time points in which mTOR was regulated secondary to LSD1i (i.e. 6 and 72h in sensitive KASUMI-1 cells and 24 and 72h in resistant THP-1 cells)
 
Contributor(s) Abdel-Aziz AK
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jan 27, 2019
Last update date Jan 28, 2020
Contact name Saverio Minucci
Organization name European Institute of Oncology
Street address via Adamello 16
City milano
ZIP/Postal code 20139
Country Italy
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (8)
GSM3580912 KAS Veh 6h
GSM3580913 KAS LSD1i 6h
GSM3580914 KAS Veh 72h
Relations
BioProject PRJNA517344
SRA SRP182609

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125719_RAW.tar 838.6 Mb (http)(custom) TAR (of BIGWIG)
GSE125719_counts_THP1_Kasumi_NCBI.txt.gz 2.9 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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