NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE125158 Query DataSets for GSE125158
Status Public on Jul 12, 2021
Title Development of novel diagnostic system for pancreas cancer including early stages measuring mRNA of whole blood cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The aim of the study is the assessment of diagnostic efficacy of extracorporeal diagnostic reagent pancreatic cancer diagnosis kit whose principle is the measurement of gene expression affected in pancreatic cancer human patients. Clinical trial registration number: UMIN000020758.
 
Overall design Development of a blood mRNA pancreatic ductal adenocarcinoma (PDAC) screening system using real-time detection PCR to detect the expression of specific genes, in order to discriminate PDAC from healthy volunteers. We performed a clinical study to assess the performance of the developed system. We collected whole blood RNA from PDAC patients and non-cancer subjects. The sensitivity of the system for PDAC diagnosis and the specificity for non-cancer volunteers were determined for the evaluation of the screening system.
Contributed by Hokuriku Liver Study Group
 
Contributor(s) Sakai Y, Honda M, Matsui S, Komori O, Murayama T, Fujiwara T, Mizuno M, Imai Y, Yoshimura K, Nasti A, Wada T, Iida N, Kitahara M, Horii R, Toshikatsu T, Nishikawa M, Okafuji H, Mizukoshi E, Yamashita T, Yamashita T, Arai K, Kitamura K, Kawaguchi K, Takatori H, Shimakami T, Terashima T, Hayashi T, Nio K, Kaneko S
Citation(s) 30742728
Submission date Jan 16, 2019
Last update date Jul 13, 2021
Contact name Yoshio Sakai
E-mail(s) yoshios@m-kanazawa.jp
Phone +81-76-265-2235
Organization name Kanazawa University
Department Department of Gastroenterology
Street address 13-1 Takara-machi
City Kanazawa
State/province Ishikawa
ZIP/Postal code 920-8641
Country Japan
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (30)
GSM3564350 N-002: Pax_RNA_Normal_2
GSM3564351 N-006: Pax_RNA_Normal_6
GSM3564352 N-008: Pax_RNA_Normal_8
Relations
BioProject PRJNA515428

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125158_RAW.tar 64.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap