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Series GSE124954 Query DataSets for GSE124954
Status Public on Jan 14, 2019
Title Genetic and Behavioural Requirements for Structural Brain Plasticity
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Human MRI studies show that experience can lead to changes in the volume of task-specific brain regions; however, the behavioural and molecular processes driving these changes remain poorly understood. Here, we used in-vivo mouse MRI and RNA sequencing to investigate the neuroanatomical and transcriptional changes induced by environmental enrichment, exercise, and social interaction. Additionally, we asked whether the volume changes require CREB, a transcription factor critical for memory formation and neuronal plasticity. Enrichment rapidly increased cortical and hippocampal volume, and these effects were not attributable to exercise or social interaction. Instead, they likely arise from learning and sensorimotor experience. Nevertheless, the volume changes were not attenuated in mice with memory impairments caused by loss of CREB, indicating that these effects are driven by processes distinct from this canonical learning and memory pathway. Finally, within brain regions that underwent volume changes, enrichment increased the expression of genes associated with axonogenesis, dendritic spine development, synapse structural plasticity, and neurogenesis, suggesting these processes underlie the volume changes detected with MRI.
 
Overall design RNA-sequencing data from CREB-knockout mice in Dorsal DG, Ventral DG and Visual Cortex in Enriched and Exercise environments
 
Contributor(s) O’Toole N, Zhang T
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Submission date Jan 11, 2019
Last update date Mar 19, 2019
Contact name Nicholas O'Toole
E-mail(s) otoolen@gmail.com
Organization name Douglas Mental Health University Institute
Street address 6875 Boulevard Lasalle
City Verdun
State/province QC
ZIP/Postal code H4H 1R3
Country Canada
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (135)
GSM3559997 HetC-dDG1
GSM3559998 HetC-dDG2
GSM3559999 HetC-dDG3
Relations
BioProject PRJNA514451
SRA SRP178474

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Supplementary file Size Download File type/resource
GSE124954_RAW.tar 33.7 Mb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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