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Series GSE124677 Query DataSets for GSE124677
Status Public on Jun 02, 2020
Title IL-12 From Endogenous cDC1, and Not Vaccine DC, Is Required for Th1 Induction
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In this study, we generated a chimeric situation by injection of different gene-modified BM-DCs into different strains of gene-modified recipient mice. This allowed us to identify the separate functional contributions of injected versus endogenous DCs for Th1 polarization. We identified the cellular source of IL-12p70 production after subcutaneous BM-DC vaccination as endogenous migratory XCR1+ bystander DCs in the skin draining lymph nodes. DC-DC and DCT cell interaction studies revealed a time course of Th0 priming by injected BM-DCs, followed by interactions of BM-DC with the IL-12+ XCR1+ bystander DCs, and finally IL-12+ XCR1+ bystander DC interactions for Th1 induction. Transcriptional profiling of the bystander DCs underscores their Th1 polarization potential. Together, this study shows that DC-vaccination requires the bystander activation of endogenous DCs for Th1 priming. Our data also challenge the general concept of Th1 priming by a single DC providing all signals 1, 2 and 3 to T cells for Th1 polarization.
 
Overall design To study the transcriptional changes occurring in the endogenous migratory bystander DCs, we sorted the migratory MHC II high CD11c+ lymph node DC subsets before (naive mice) and 48h after BM-DC injection (bystander activation). Thereby we could compare migratory XCR1+ CD11b- dDCs (cDC1s), CD11b+ XCR1- dDCs (cDC2s), and CD11b- XCR1- DCs (DN) at steady-state and 48h after LPS.BM-DC injection. Also, the appearance of CD11b+ CD64+ Ly6Clow inflammation-induced MoDCs was identified and these cells were also sorted at 48h.
 
Contributor(s) Ashour D, Arampatzi P, Förstner KU, Kaisho T, Beilhack A, Erhard F, Lutz MB
Citation(s) 32434994
Submission date Jan 04, 2019
Last update date Jun 03, 2020
Contact name Tom Gräfenhan
E-mail(s) ht-seq.sysmed@uni-wuerzburg.de
Phone +49 - 931 - 31 - 80814
Organization name University of Wuerzburg
Department Core Unit SysMed
Lab Raum D15.02.045
Street address Josef-Schneider-Str. 2, Bau D15
City Würzburg
ZIP/Postal code 97080
Country Germany
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (21)
GSM3539294 Non_injected_XCR1_DCs_I
GSM3539295 Non_injected_CD11b_DCs_I
GSM3539296 Non_injected_DN_DCs_I
Relations
BioProject PRJNA513047
SRA SRP175307

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124677_count_table.csv.gz 1.1 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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