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Series GSE124649 Query DataSets for GSE124649
Status Public on Apr 19, 2019
Title Analysis of mouse lymph node fibroblastic reticular cells (FRC) gene signature during autoimmune inflammation (EAE)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We determined differentially regulated gene expression profile in WT and Il17RA-/- FRC during EAE. gene signature in FRC during EAE.
 
Overall design FRC were isolated from skin draining lymph nodes of WT and IL17RA-/- mice day 12 post immunization with CFA and MOG peptide
 
Contributor(s) Majumder S, McGeachy M, Rittenhouse N, Poholek A
Citation(s) 30962593
Submission date Jan 04, 2019
Last update date Apr 19, 2019
Contact name Amanda Catherine Poholek
E-mail(s) poholeka@pitt.edu
Organization name University of Pittsburgh
Department Pediatrics
Street address 4401 Penn Ave., Rangos Research Center 8129
City Pittsburgh
State/province Pennsylvania
ZIP/Postal code 15224
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM3538642 WT FRC rep 1
GSM3538643 WT FRC rep 2
GSM3538644 IL17RAKO FRC rep 1
Relations
BioProject PRJNA512995
SRA SRP175238

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124649_FRC_EAE_IL17RAKOexp_FPKM.txt.gz 332.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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