NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE124599 Query DataSets for GSE124599
Status Public on Feb 03, 2019
Title RNA-seq data for tumor tissues from mice fed with normal diet (ND) or high cholesterol diet (HCD) [Hep1-6]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To address how serum cholesterol affected tumor progression, C57BL/6J mice were placed on either normal diet or high cholesterol diet for 4 weeks, and then Hep1-6 cells were subcutaneously injected into the right flanks of mice. We performed transcriptome sequencing analysis (RNA-seq) on tumor tissues from ND and HCD groups.
 
Overall design Three tumor tissues from ND group (ND-1,ND-2,ND-3) and three tumor tissues from HCD group (HCD-1,HCD-2,HCD-3) were analyzed.
 
Contributor(s) Qin W, Yang Z, Fu J, Wang H
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jan 03, 2019
Last update date Mar 01, 2019
Contact name Fu jing
Organization name Eastern Hepatobiliary Surgery Hospital
Department Liver Centre of SMMU
Lab International Cooperation Laboratory on Signal Transduction
Street address No.225 Changhai road
City shanghai
ZIP/Postal code 200438
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (6)
GSM3537438 Tumor tissue from ND mice,number 1
GSM3537439 Tumor tissue from ND mice,number 2
GSM3537440 Tumor tissue from ND mice,number 3
Relations
BioProject PRJNA512625
SRA SRP175082

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124599_BC160374_All_sample_gene_expression_information.txt.gz 999.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap