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Series GSE124140 Query DataSets for GSE124140
Status Public on Feb 01, 2019
Title Antagonism of IAPs enhances CAR T cell efficacy
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Chimeric antigen receptor (CAR) T cell therapy has proven highly successful in the treatment of hematological malignancies, notably acute lymphoblastic leukemia and B cell lymphoma. However, the efficacy of CAR T cells against solid tumors is poor, likely due to tumor-associated immunosuppression. Here, we demonstrate that antagonizing Inhibitor of Apoptosis Proteins (IAPs) with the clinical smac-mimetic, birinapant, significantly enhanced the anti-tumor activity of CAR T cells in a TNF-dependent manner. Enhanced tumor cell death occurred independently of the perforin-mediated granule exocytosis pathway, underscoring the cytotoxic potential of CAR T cell-derived TNF. Importantly, combining CAR T cell therapy with birinapant dramatically reduced established tumor growth in vivo, where either therapy alone was relatively ineffective. Using patient biopsy-derived tumoroids, we demonstrate the synergistic potential of combining CAR T cell therapy with smac-mimetics. Taken together, we identify CAR T cell-derived TNF as a potent anti-tumor effector, which can be further harnessed by smac-mimetics.
 
Overall design MC38 HER2/ AU565 cells were either left untreated or incubated with CAR T cells [no smac-mimetics] (in triplicate/ duplicate) at a 2:1 effector-target ratio for 6 hrs followed by 3’ RNA-Seq of viable cells.
 
Contributor(s) Oliaro J, Zethoven M
Citation(s) 30651288
Submission date Dec 19, 2018
Last update date May 04, 2019
Contact name Jane Oliaro
E-mail(s) jane.oliaro@petermac.org
Organization name Peter MacCallum Cancer Centre
Street address 305 Grattan Street
City Melbourne
State/province Victoria
ZIP/Postal code 3000
Country Australia
 
Platforms (2)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (10)
GSM3521472 JM1
GSM3521473 JM2
GSM3521474 JM3
Relations
BioProject PRJNA510825
SRA SRP173953

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124140_AU565_HTSeq_Expression_Matrix.txt.gz 197.5 Kb (ftp)(http) TXT
GSE124140_MC38_HER2_HTSeq_Expression_Matrix.txt.gz 173.1 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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