NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE123765 Query DataSets for GSE123765
Status Public on Aug 18, 2020
Title Subpopulations second heart field ATAC-seq
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Profiling of open chromatin on second heart field subpopulations FACS sorted
 
Overall design Microdissection of the second heart field region in E9.5 embryos, digestion and cell sorting
 
Contributor(s) Stefanovic S, Devignes J, Zaffran S
Citation(s) 32804075
Submission date Dec 13, 2018
Last update date Aug 18, 2020
Contact name Sonia Stefanovic
E-mail(s) Sonia.STEFANOVIC@univ-amu.fr
Organization name INSERM U1251
Street address 27 BD JEAN MOULIN
City MARSEILLE
ZIP/Postal code 13385
Country France
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (7)
GSM3511058 GFP_neg_Ad2.1
GSM3511059 GFP_neg_Ad2.2
GSM3511060 Hoxb1GFP_Ad2.3
Relations
BioProject PRJNA509774
SRA SRP173363

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE123765_Differentiel_AtacSeq_Analysis_GFPHoxb1_vs_Mef2cTdT.xlsx 203.3 Kb (ftp)(http) XLSX
GSE123765_Hoxb1GFP_All.IDR0.1.narrowPeak.annotated.xlsx 10.9 Mb (ftp)(http) XLSX
GSE123765_Mef2cTdT_All.IDR0.1.narrowPeak.annotated.xlsx 11.3 Mb (ftp)(http) XLSX
GSE123765_RAW.tar 43.8 Mb (http)(custom) TAR (of XLS)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap