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Series GSE123758 Query DataSets for GSE123758
Status Public on Dec 11, 2021
Title Diverse mammalian retinal ganglion cell types revealed by single cell transcriptome profiling
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary By single-cell RNA-sequencing (scRNA-seq) analysis, we classify adult mouse RGCs into 28 types, which can be distinguished by distinct sets of characteristic genes or even by single gene markers.
Overall design Single-cell RNA-seq of 3-month mouse RGCS (Retinal ganglion cells) that were enriched by FACS sorting of Brn3b::GFP reporter.
Contributor(s) Xiang M, Jin K, Hu Y, Wei W, Zhang R, Lei Q, Liu S, Zheng X, Guo Y, Zhong J, Rao P, Cheng L
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Submission date Dec 13, 2018
Last update date Dec 11, 2021
Contact name Kangxin Jin
Organization name Sun Yat-sen University
Department Zhongshan Ophthalmic Center
Street address 7 Jinsui Rd
City Guangzhou
State/province Guangdong Province
ZIP/Postal code 510510
Country China
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (4)
GSM3510935 Retina 1
GSM3510936 Retina 2
GSM3510937 Retina 3
BioProject PRJNA509760
SRA SRP173358

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE123758_RGC_Matrix_all_cells.csv.gz 10.0 Mb (ftp)(http) CSV
GSE123758_barcodes.tsv.gz 13.7 Kb (ftp)(http) TSV
GSE123758_filtered_gene_bc_matrices_h5.h5.gz 14.2 Mb (ftp)(http) H5
GSE123758_genes.tsv.gz 212.5 Kb (ftp)(http) TSV
GSE123758_matrix.mtx.gz 17.9 Mb (ftp)(http) MTX
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Raw data are available in SRA
Processed data are available on Series record

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