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Series GSE122767 Query DataSets for GSE122767
Status Public on Feb 05, 2019
Title Genetic AMPK activation in liver protects against diet-induced obesity and NAFLD
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We developed a GEMM in which AMPK can be inducibly activated in vivo (iAMPK mice). We provide here the data (RNA seq) on the transcriptional changes induced by AMPK activation in livers from mice fed a high-fat diet.
 
Overall design iAMPK and L-iAMPK mice were fed a high-fat diet (45% calories from fat), plus or minus doxycycline, for eight weeks before collection of liver samples. Doxycycline-treated L-iAMPK mice activate AMPK in liver.
 
Contributor(s) Garcia D, Shokhirev MN, Shaw RJ
Citation(s) 30605676
Submission date Nov 20, 2018
Last update date Mar 28, 2022
Contact name April Elizabeth Williams
E-mail(s) apriljack06@gmail.com, awilliams@salk.edu
Phone 7345461645
Organization name Salk Institute for Biological Studies
Department IGC
Street address 10010 N Torrey Pines Rd
City San Diego
State/province California
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (12)
GSM3484730 iAMPK_HFD_liver1
GSM3484731 iAMPK_HFD_liver2
GSM3484732 iAMPK_HFD_liver3
Relations
BioProject PRJNA506251
SRA SRP169946

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Supplementary file Size Download File type/resource
GSE122767_Differential_expression__RNA_seq_data_for_Garcia_et_al.xlsx 6.7 Mb (ftp)(http) XLSX
GSE122767_FPKM__RNA_seq_data_for_Garcia_et_al.xlsx 4.5 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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