|
| Status |
Public on Dec 31, 2019 |
| Title |
Identification of cis-regulatory elements affecting pancreatic Islet maturation using chromatin accessibility variations |
| Organism |
Rattus norvegicus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
we were able to find several known and unforeseen key transcriptional regulators acting at cis-regulatory sites and promoters which depicted a differential accessibility and induced differential gene expression along maturation.
|
| |
|
| Overall design |
ATAC-seq of Post natal 10 days (P10) and adults rats (N=3)
|
| |
|
| Contributor(s) |
Sobel J, Guay C, Menoud V, Rodriguez-Trejo A, Stoll L, Regazzi R |
| Citation(s) |
33888791 |
| |
| Submission date |
Nov 20, 2018 |
| Last update date |
Apr 28, 2021 |
| Contact name |
Jonathan Aryeh Sobel |
| E-mail(s) |
jonathan.sobel@weizmann.ac.il
|
| Phone |
00972587889058
|
| Organization name |
Weizmann Institute of science
|
| Department |
Biomolecular Sciences
|
| Lab |
Asher
|
| Street address |
Benoziyo Building for Biological Sciences, room 277S, Weizmann Institute of Science
|
| City |
Rehovot |
| ZIP/Postal code |
7610001 |
| Country |
Israel |
| |
|
| Platforms (1) |
| GPL18694 |
Illumina HiSeq 2500 (Rattus norvegicus) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA506207 |
| SRA |
SRP169853 |
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