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Series GSE122522 Query DataSets for GSE122522
Status Public on May 09, 2019
Title Therapeutic targeting of BRD4 in head neck squamous cell carcinoma
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The bromodomain and extraterminal family members are epigenetic readers and transcriptional coactivators which are critically involved in various biological processes including tumorigenesis. BRD4 has been increasingly appreciated as a key oncogene and promising anticancer target. Here, we sought to characterize the expression of BRD4 and its tumorigenic roles as well as therapeutic targeting in HNSCC. Expression of BRD4 mRNA and protein was determined by bioinformatics interrogation of public available databases, primary HNSCC samples and 4NQO-induced HNSCC animal model. The tumorigenic roles of BRD4 in HNSCC were evaluated by genetic and pharmacological approach in vitro and in vivo. Therapeutic efficiency of BRD4 targeting by JQ1 was assessed in three preclinical models including xenograft model, 4NQO-induced model and patients-derived xenograft model. Gene candidates responsible for therapeutic effects of JQ1 were identified by transcriptional profiling in HNSCC cells after JQ1 exposure. Significant upregulation of BRD4 was found in primary HNSCC samples and 4NQO-induced HNSCC model. Its overexpression associated with aggressive clinicopathological features and inferior overall and disease-free survival. BRD4 depletion by genetic silencing or pharmacological inhibition impaired cell proliferation, migration and invasion and reduced tumor growth and metastasis in vivo. Transcriptional profiling of HNSCC cells following JQ1 exposure identified hundreds of genes which might mediated its antitumor effects and enriched in cancer-relevant pathways. A novel prognostic risk score derived from JQ1-regualted genes was developed to stratify patients into subgroups with favorable or inferior prognosis. Our findings reveal that BRD4 serves as a novel oncogene driving cancer progression and a robust prognostic biomarker in HNSCC. Therapeutic targeting of BRD4 represents a potent and promising strategy against HNSCC.
 
Overall design JQ1 induced gene expression in human head neck squamous cell carcinoma cells were detected at 24 hours after exposure to dose of 0, 0.5 μM. Two different kinds of HNSCC cells Cal27 and Fadu were utilized in this study.
 
Contributor(s) Wu Y, Wang Y, Diao P, Zhang W, Li J, Ge H, Song Y, Li Z, Wang D, Liu L, Jiang H, Cheng J
Citation(s) 31037138
Submission date Nov 14, 2018
Last update date May 09, 2019
Contact name Jie Cheng
E-mail(s) jiecheng_njmu@163.com
Phone 86-25-85031880
Organization name Nanjing Medical University
Street address 136 Hanzhong Road
City Nanjing
State/province Jiangsu
ZIP/Postal code 210029
Country China
 
Platforms (1)
GPL21185 Agilent-072363 SurePrint G3 Human GE v3 8x60K Microarray 039494 [Probe Name Version]
Samples (4)
GSM3473237 Cal27_jq1
GSM3473238 Cal27_nc
GSM3473239 Fadu_jq1
Relations
BioProject PRJNA505480

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE122522_Normalized_Data.txt.gz 7.0 Mb (ftp)(http) TXT
GSE122522_RAW.tar 49.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data are available on Series record

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