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Series GSE122459 Query DataSets for GSE122459
Status Public on Nov 14, 2018
Title SLE PBMC RNA-seq
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA sequencing of systemic lupus erythematosus (SLE) and healthy PBMCs to measure transcriptional changes in gene and endogenous retrovirus expression
 
Overall design RNA sequencing using RNA obtained from PBMCs of SLE patients and healthy controls
 
Contributor(s) Tokuyama M, Iwasaki A
Citation(s) 30455304
Submission date Nov 13, 2018
Last update date Mar 27, 2019
Contact name Maria Tokuyama
E-mail(s) maria.tokuyama@yale.edu
Organization name Yale University
Street address 300 Cedar Street TAC S640
City New Haven
State/province CT
ZIP/Postal code 06520
Country USA
 
Platforms (2)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (26)
GSM3466767 SLE_1
GSM3466768 SLE_2
GSM3466769 SLE_3
Relations
BioProject PRJNA505280
SRA SRP168421

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE122459_normalized_ERVcounts_all_samples.xlsx.gz 381.3 Kb (ftp)(http) XLSX
GSE122459_normalized_genes_all_samples.xlsx.gz 16.1 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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