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Series GSE121796 Query DataSets for GSE121796
Status Public on Jan 01, 2019
Title C5aR1 regulates T-follicular-helper differentiation and chronic graft-versus-host disease bronchiolitis obliterans
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The goal of the study was to determine the effect of T cell expressed C5ar1 on transcriptional profiles of in vivo generated allogeneic T follicular helper cells
 
Overall design 10 million CD8 depleted spleen cells from WT or C5aR1-deficient donors were injected into (bxd)F1 recipients and 7 days later donor CXCR5, PD1hi cells were flow sorted and sequenced. Side by side control samples of naïve WT and C5ar1 deficient CD4 cells were included
 
Contributor(s) Zhang W, Yi Z, Heeger PS
Citation(s) 30568034
Submission date Oct 25, 2018
Last update date Apr 02, 2019
Contact name Weijia Zhang
E-mail(s) weijia.zhang@mssm.edu
Organization name Icahn School of Medicine at Mount Sinai
Department Renal
Lab Bioinfomatics
Street address 1 Gustave L. Levy Pl
City New York
State/province NY
ZIP/Postal code 10029
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (8)
GSM3446273 S35
GSM3446274 S36
GSM3446275 S37
Relations
BioProject PRJNA498508
SRA SRP166980

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121796_RAW.tar 1.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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