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Series GSE121602 Query DataSets for GSE121602
Status Public on Oct 22, 2019
Title Global characterization of myeloid cells in murine lung cancer models by single-cell seqencing
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We characterized myeloid cell populations in murine lung cancer models by single-cell sequencing. These data were in line with our previous findings about myeloid cell subsets in tumor microenvironment.
Overall design The gene expression profiles of 3501 cells from murine LLC lung cancer models was generated by BD Rhapsody Single-Cell Analysis System and Illumina NextSeq.
Contributor(s) Takahashi H, Varner JA
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NIH grant(s)
Grant ID Grant title Affiliation Name
R01 CA167426 Role of PI3Kinase in Tumor Progression and Metastasis THE REGENTS OF THE UNIV. OF CALIF., UNIV. OF CALIF., SAN DIEGO Judith A VARNER
Submission date Oct 22, 2018
Last update date Oct 23, 2019
Contact name Judith Anne Varner
Phone 858-822-0086
Organization name University of California, San Diego
Department Pathology
Lab Moores Cancer Center
Street address 3855 Health Sciences Drive
City La Jolla
State/province CA
ZIP/Postal code 92093-0819
Country USA
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (1)
GSM3439947 WT_LLC
BioProject PRJNA497862
SRA SRP166326

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121602_Cell_index-barcode_.csv.gz 61.2 Kb (ftp)(http) CSV
GSE121602_Judith_Varner_UCSD_Supplemental_to_Mouse_amplicons.fasta.gz 50.7 Kb (ftp)(http) FASTA
GSE121602_RAW.tar 670.0 Kb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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