NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE121471 Query DataSets for GSE121471
Status Public on Apr 17, 2020
Title Gut-Resident IL10+CX3CR1hi Macrophages Induce Tertiary Lymphoid Structures and IgA Response in Situ
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Gut resident IL10+CX3CR1hi macrophages drive development of mucosal tertiary lymphoid structures that serve as ectopic site of the IgA response to enteric infection.
 
Overall design RNA-seq data was obtained from different cell populations sorted from LB of control mice and mice infected with Salmonella enterica (SL1344) (day 5)
 
Contributor(s) Bogunovic M, Koscsó B
Citation(s) 32276965
Submission date Oct 18, 2018
Last update date Jun 22, 2020
Contact name Andrey Morgun
E-mail(s) Andriy.Morgun@oregonstate.edu
Phone 541-737-8047
Organization name Oregon State University
Street address 1601 SW Jefferson Way
City Corvallis
State/province OR
ZIP/Postal code 97331
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (69)
GSM3436825 MB01_ACATTA small bowel CD103+ CD11b+ DC
GSM3436826 MB02_GGTGAG small bowel CD103+ CD11b+ DC
GSM3436827 MB03_CGAAGG small bowel CD103+ CD11b+ DC
Relations
BioProject PRJNA497440
SRA SRP166098

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121471_rel_mill_quantile.txt.gz 5.0 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap