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Series GSE121305 Query DataSets for GSE121305
Status Public on Oct 16, 2019
Title RNA-seq of colon tissue from wild type and Elf4-/- mice with colitis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary ELF4 is a transcription factor, and to identify its potential targets, the inflamed colons of wild type and Elf4 deficient mice were subjected to whole genome RNA sequencing.
 
Overall design wild type and Elf4-/- mice were treated with 3% DSS, at day 6 post treatment, inflamed distal colon were harvested.
 
Contributor(s) Du H, You F
Citation(s) 33665583
Submission date Oct 16, 2018
Last update date Mar 11, 2021
Contact name Fuping You
E-mail(s) fupingyou@hsc.pku.edu.cn
Organization name peking university health science center
Department department of immunology
Street address haidian district xueyuan road 38
City beijing
ZIP/Postal code 100191
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (4)
GSM3431136 WT rep1
GSM3431137 WT rep2
GSM3431138 Elf4-KO rep1
Relations
BioProject PRJNA496615
SRA SRP165849

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121305_DSSwvsDSSk.DiffExpGeneFilter.anno.txt.gz 227.8 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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