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Series GSE120928 Query DataSets for GSE120928
Status Public on Aug 21, 2019
Title Global gene expression analysis in Naive vs. ASC KO murine CD4 T cells post-activation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Naïve CD62L+ CD44- CD25- CD4+ splenic mouse T cells from WT or ASC KO cells were left untreated or treated with Anti-CD3/28 antobodies for 12hr
 
Overall design Naïve Splenic murine CD4+ T cells from WT or SC KO mice were stimulated with anti-CD3/CD28 antobodies and the differential gene expression of activated WT vs. KO cells were assessed via RNA-sequencing
 
Contributor(s) Khameneh HJ, Leong KW, Mencarelli A, Vacca M, Mambwe B, Neo K, Tay A, Zolezzi F, Poidinger M, Lee B, Mortellaro A
Citation(s) 31379813
Submission date Oct 08, 2018
Last update date Aug 21, 2019
Contact name Bernett Lee
E-mail(s) bernett_lee@immunol.a-star.edu.sg
Organization name Singapore Immunology Network
Street address 8A Biomedical Grove #03-06 Immunos
City NA
ZIP/Postal code 138648
Country Singapore
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (5)
GSM3421723 CD4 WT Stimulated 1 AntiCD3/CD28
GSM3421724 CD4 WT Stimulated 3 AntiCD3/CD28
GSM3421725 CD4 ASC KO Stimulated 1 AntiCD3/CD28
Relations
BioProject PRJNA495045
SRA SRP164420

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE120928_tpm_values.txt.gz 1.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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