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Series GSE120799 Query DataSets for GSE120799
Status Public on May 22, 2020
Title Transcriptome profiling of Dek over-expressed quiescent muscle stem cells in vivo
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To understand the molecular signatures of Dek over-expressed quiescent muscle stem cells in vivo, we isolated quiescent muscle stem cells by fixation using perfusion technique and profiled the transcriptome by RNA-Seq.
 
Overall design The polyA+ RNA from satellite cells were sequenced using Illumina NextSeq 500 (2 x 75).
 
Contributor(s) Yue L, Wan R, Cheung TH
Citation(s) 32502396
Submission date Oct 03, 2018
Last update date Jun 28, 2020
Contact name Tom Cheung
Organization name Hong Kong University of Science and Technology
Department Division of Life Science
Street address Clear Water Bay, Kowloon
City Hong Kong
ZIP/Postal code N/A
Country Hong Kong
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM3415968 YFP-rep1
GSM3415969 YFP-rep2
GSM3415970 DEK-rep1
Relations
BioProject PRJNA494565
SRA SRP163254

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE120799_dekcoe-all.txt.gz 454.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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