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Series GSE120734 Query DataSets for GSE120734
Status Public on Oct 03, 2018
Title mRNA-seq for etoposide-treated TLP-knockdown cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We explored the mechanism by which TLP affects DNA damage response. We performed mRNA-seq analysis of non-treated and etoposide-treated samples in control and TLP-knockdown cells. We show that TLP is critical for global transcriptional repression after double-strand DNA breaks (DSBs).
Overall design Examination of non-treated and etoposide-treated samples in control and TLP-knockdown cells
Contributor(s) Suzuki H, Yamaguchi Y
Citation(s) 30890736
Submission date Oct 02, 2018
Last update date Mar 31, 2019
Contact name Hidefumi Suzuki
Organization name Yokohama City University
Street address Fukuura 3-9
City Yokohama
ZIP/Postal code 236-0004
Country Japan
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (8)
GSM3409487 ctrl_nt1
GSM3409488 ctrl_nt2
GSM3409489 ctrl_eto1
BioProject PRJNA494328
SRA SRP163126

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE120734_RAW.tar 10.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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