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Series GSE119688 Query DataSets for GSE119688
Status Public on Oct 31, 2018
Title CHD7 is Suppressed in the Perinecrotic/Ischemic Microenvironment and is a Novel Regulator of Angiogenesis
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary In a study focused on the role for CHD7 in angiogenesis we completed RNA-sequencing of D456, a glioblastoma xenograft line and neural precursor cells after CHD7 knockdown
 
Overall design RNA-sequencing after shRNA KD of CHD7 in two cell lines
 
Contributor(s) Cooper SJ, Hjelmeland AB
Citation(s) 30629778
Submission date Sep 08, 2018
Last update date Mar 27, 2019
Contact name Sara Cooper
E-mail(s) sjcooper@hudsonalpha.org
Phone 256-327-9491
Organization name HudsonAlpha Institute
Street address 601 Genome Wau
City Huntsville
State/province AL
ZIP/Postal code 35806
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (12)
GSM3380847 NPC_NT_A
GSM3380848 NPC_CHD7_29_A
GSM3380849 NPC_CHD7_32_A
Relations
BioProject PRJNA489973
SRA SRP160423

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119688_star_unstranded_counts_Anita_CHD7_171130.txt.gz 644.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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