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Series GSE119549 Query DataSets for GSE119549
Status Public on Sep 06, 2018
Title mRNA-seq of bypass grafts in mice, utilizing the vena cava as carotid artery bypass graft
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Surgical interventions on blood vessels bear a risk for intimal hyperplasia and atherosclerosis as a consequence of injury. A specific feature of intimal hyperplasia is the loss of vascular smooth muscle cell (VSMC) differentiation gene expression. We hypothesized that immediate responses following injury induce vascular remodeling. To differentiate injury due to trauma, reperfusion and pressure changes we analyzed vascular responses to carotid artery bypass grafting in mice compared to transient ligation. As a control, the carotid artery was surgically laid open only. In both, bypass or ligation models, the inflammatory responses were transient, peaking after 6h, whereas the loss of VSMC differentiation gene expression persisted. Extended time kinetics showed that transient carotid artery ligation was sufficient to induce a persistent VSMC phenotype change throughout 28 days. Transient arterial ligation in ApoE knockout mice resulted in atherosclerosis in the transiently ligated vascular segment but not on the not-ligated contralateral side. The VSMC phenotype change could not be prevented by anti-TNF antibodies, Sorafenib, Cytosporone B or N-acetylcysteine treatment. Surgical interventions involving hypoxia/reperfusion are sufficient to induce VSMC phenotype changes and vascular remodeling. In situations of a perturbed lipid metabolism this bears the risk to precipitate atherosclerosis.
 
Overall design Comparison of mRNA changes between control tissue and bypass grafts perfused for 1, 6 and 24h. Number of replicated per group =4-5
 
Contributor(s) Finsterwalder R, Ganesan MK, Leb H, Habertheuer A, Basílio J, Lang I, Krunic M, Wiedemann D, Petzelbauer P
Citation(s) 30289932
Submission date Sep 05, 2018
Last update date Mar 19, 2019
Contact name Peter Petzelbauer
E-mail(s) peter.petzelbauer@meduniwien.ac.at
Organization name Medical University Vienna
Department Dermatology
Lab SERD
Street address Währinger Gürtel
City vienna
ZIP/Postal code 1090
Country Austria
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (17)
GSM3377398 BSF_0148_C6GU0ANXX_7_ControlIVC1
GSM3377399 BSF_0148_C6GU0ANXX_7_ControlIVC2
GSM3377400 BSF_0148_C6GU0ANXX_7_ControlIVC3
Relations
BioProject PRJNA489494
SRA SRP159688

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119549_24hr_1hr_all.xls.gz 4.9 Mb (ftp)(http) XLS
GSE119549_24hr_6hr_all.xls.gz 5.2 Mb (ftp)(http) XLS
GSE119549_6hr_1hr_all.xlsx 6.0 Mb (ftp)(http) XLSX
GSE119549_all_comparisons_w_control.xls.gz 5.1 Mb (ftp)(http) XLS
GSE119549_control_1hr_all.xls.gz 4.5 Mb (ftp)(http) XLS
GSE119549_control_24hr_all.xls.gz 5.0 Mb (ftp)(http) XLS
GSE119549_control_6hr_all.xls.gz 5.0 Mb (ftp)(http) XLS
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Raw data are available in SRA
Processed data are available on Series record

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