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Series GSE119423 Query DataSets for GSE119423
Status Public on Jan 01, 2019
Title The SUMO Pathway as a Therapeutic Option in Pancreatic Cancer
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Pancreatic ductal adenocarcinoma (PDAC) still carries a dismal prognosis with overall five-year survival of 8%. Conventional combination chemotherapies are a clear advance in the treatment of PDAC, however subtypes of the disease exist, which exhibit extensive resistance to such therapies. Genomic MYC amplifications represent a distinct subset of PDAC with an aggressive tumor biology. It is clear that hyperactivation of MYC generates dependencies, which can be exploited therapeutically. To find MYC-associated dependency we analyzed human PDAC expression dataset. We observed that MYC is connected to the sumoylation machinery in PDAC. Components of the SUMO pathway mark a PDAC subtype with worse prognosis and we provide evidence that PDACs with a MYChigh/SUMOhigh phenotype respond to a novel SUMO inhibitor, offering the opportunity to develop novel stratified PDAC therapies
 
Overall design IMIM-PC1 cells stably expressing the MYC-ER fusion protein were treated with 500nM 4-OHT for an interval of 24h.
 
Contributor(s) Wirth M, Biederstädt A, Keller U, Schneider G
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Submission date Sep 04, 2018
Last update date Mar 27, 2019
Contact name Matthias Wirth
Organization name Charité Berlin
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12203
Country Germany
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (6)
GSM3374560 Ctrl-rep1
GSM3374561 Ctrl-rep2
GSM3374562 Ctrl-rep3
Relations
BioProject PRJNA489233
SRA SRP159512

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119423_ImimPC1_normalized.txt.gz 649.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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