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| Status |
Public on Aug 31, 2018 |
| Title |
PatchSeq analysis of Pthlh expressing cells of the mouse dorsolateral striatum |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In order to investigate how electrophysiological properties vary within the Pthlh population in the dorsolateral striatum we performed PatchSeq analysis of neurons labeled in 5HT3a(EGFP) and Pvalb(cre)::RCE/tdTomato mouse lines, which included Th, Npy/Mia, Cck, and Cck/Vip expressing cells.
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| Overall design |
98 FACS-sorted single cells isolated from the dorso-lateral striatum from either a 5ht3a-EGFP mouse line or a Lhx6-cre mouse crossed onto a R26R-tdTomato reporter mouse line
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| Contributor(s) |
Muñoz-Manchado AB, Zeisel A, Linnarsson S, Hjerling-Leffler J |
| Citation(s) |
30134177 |
| |
| Submission date |
Aug 30, 2018 |
| Last update date |
Mar 19, 2019 |
| Contact name |
Sten Linnarsson |
| Organization name |
Karolinska Institutet
|
| Department |
Medical Biochemistry and Biophysics
|
| Lab |
Molecular Neurobiology
|
| Street address |
Scheeles väg 1
|
| City |
Stockholm |
| ZIP/Postal code |
171 65 |
| Country |
Sweden |
| |
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| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
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| Samples (98)
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| This SubSeries is part of SuperSeries: |
| GSE106708 |
Single cell RNA sequencing of interneurons of the mouse dorsolateral striatum |
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| Relations |
| BioProject |
PRJNA488609 |
| SRA |
SRP159173 |
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