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Series GSE119153 Query DataSets for GSE119153
Status Public on Apr 23, 2019
Title Targeting the perivascular niche sensitizes disseminated tumour cells to chemotherapy
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The presence of disseminated tumour cells (DTCs) in bone marrow predicts poorer metastasis-free survival of breast cancer patients with localized disease, and their eradication improves long-term prognosis. DTCs persist in distant tissues despite administration of adjuvant chemotherapy, ostensibly because the majority of DTCs are quiescent. Here, we provide evidence that the microenvironment of DTCs protects them from chemotherapy independent of cell cycle status. We show that chemoresistant DTCs associate with the perivascular niche (PVN) of distant tissues, and that they are protected from therapies by vascular endothelium. Inhibiting key integrin-mediated interactions between DTCs and the PVN, driven partly by endothelial-derived von Willebrand Factor, sensitizes DTCs to chemotherapy and prevents bone metastasis. Importantly, chemosensitization is achieved without inducing DTC proliferation, or exacerbating chemotherapy-induced toxicities. These results suggest that prefacing adjuvant therapy with integrin inhibitors is a viable clinical strategy to eradicate DTCs and prevent metastasis.
 
Overall design RNA sequencing of bone marrow mesenchymal stem cells (MSCs) and bone marrow microvascular niches (MVNs) by RNAseq using Illumina HiSeq 2500.
 
Contributor(s) Carlson P, Dasgupta A, Grzelak CA, Kim J, Barrett A, Coleman IM, Shor RE, Goddard ET, Dai J, Schweitzer EM, Lim AR, Cheresh DA, Nelson PS, Hansen KC, Ghajar CM
Citation(s) 30664790
Submission date Aug 28, 2018
Last update date Apr 25, 2019
Contact name Ilsa Coleman
E-mail(s) icoleman@fredhutch.org
Phone 206-667-1703
Organization name Fred Hutchinson Cancer Center
Department Human Biology
Lab Peter Nelson
Street address 1100 Fairview Ave N, E2-112
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (4)
GSM3359656 MSC-EC-Vehicle_1
GSM3359657 MSC-EC-Vehicle_2
GSM3359658 MSC-Vehicle_1
Relations
BioProject PRJNA488272
SRA SRP159024

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119153_RAW.tar 2.7 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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