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Status |
Public on Sep 30, 2018 |
Title |
Transcriptome analysis of control and TFEB/TFE3 DKO RAW264.7 in response to DNA Damage |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing
|
Summary |
We analyze the contribution of the transcription fators TFEB and TFE3 to the DNA Damage Response (DDR)
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Overall design |
Control and TFEB/TFE3 DKO RAW264.7 were treated with etoposide for 8 hours and the mRNA profiles were analyzed by RNA-seq
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Contributor(s) |
Puertollano R, Pirooznia M |
Citation(s) |
30520728 |
|
Submission date |
Aug 14, 2018 |
Last update date |
Mar 21, 2019 |
Contact name |
Mehdi Pirooznia |
E-mail(s) |
pirooznia@gmail.com
|
Phone |
410-340-6052
|
Organization name |
National Institutes of Health
|
Street address |
12 SOUTH DR
|
City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20892 |
Country |
USA |
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Platforms (1) |
GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
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Samples (12)
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GSM3331424 |
JM3334_S4: TFEB/TFE3 DKO RAW264.7 Control rep 1 |
GSM3331425 |
JM3334_S5: TFEB/TFE3 DKO RAW264.7 Control rep 2 |
GSM3331426 |
JM3334_S6: TFEB/TFE3 DKO RAW264.7 Control rep 3 |
GSM3331427 |
JM3334_S7: Null RAW264.7 8h Etoposide rep 1 |
GSM3331428 |
JM3334_S8: Null RAW264.7 8h Etoposide rep 2 |
GSM3331429 |
JM3334_S9: Null RAW264.7 8h Etoposide rep 3 |
GSM3331430 |
JM3334_S10: TFEB/TFE3 RAW264.7 MEFs 8h Etoposide rep 1 |
GSM3331431 |
JM3334_S11: TFEB/TFE3 RAW264.7 MEFs 8h Etoposide rep 2 |
GSM3331432 |
JM3334_S12: TFEB/TFE3 RAW264.7 MEFs 8h Etoposide rep 3 |
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This SubSeries is part of SuperSeries: |
GSE118518 |
Transcriptome analysis of control and TFEB/TFE3 DKO MEFs and RAW264.7 in response to DNA Damage |
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Relations |
BioProject |
PRJNA485900 |
SRA |
SRP157893 |