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Series GSE118517 Query DataSets for GSE118517
Status Public on Sep 30, 2018
Title Transcriptome analysis of control and TFEB/TFE3 DKO RAW264.7 in response to DNA Damage
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We analyze the contribution of the transcription fators TFEB and TFE3 to the DNA Damage Response (DDR)
 
Overall design Control and TFEB/TFE3 DKO RAW264.7 were treated with etoposide for 8 hours and the mRNA profiles were analyzed by RNA-seq
 
Contributor(s) Puertollano R, Pirooznia M
Citation(s) 30520728
Submission date Aug 14, 2018
Last update date Mar 21, 2019
Contact name Mehdi Pirooznia
E-mail(s) pirooznia@gmail.com
Phone 410-340-6052
Organization name National Institutes of Health
Street address 12 SOUTH DR
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (12)
GSM3331421 JM3334_S1: Null RAW264.7 Control rep 1
GSM3331422 JM3334_S2: Null RAW264.7 Control rep 2
GSM3331423 JM3334_S3: Null RAW264.7 Control rep 3
This SubSeries is part of SuperSeries:
GSE118518 Transcriptome analysis of control and TFEB/TFE3 DKO MEFs and RAW264.7 in response to DNA Damage
Relations
BioProject PRJNA485900
SRA SRP157893

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118517_JM3334_raw_counts.txt.gz 596.8 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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