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Series GSE118512 Query DataSets for GSE118512
Status Public on Nov 06, 2018
Title Induction of autonomous memory alveolar macrophages requires T-cell help and is critical to trained immunity
Organism Mus musculus
Experiment type Expression profiling by array
Summary Innate immune memory is a new important area of research. However, innate immune memory at the major mucosal sites remains poorly understood. Here we show that respiratory viral infection induces long-lasting memory alveolar macrophages (AM). Memory AM are programed to express high MHC II, carry a defense-ready gene signature, and produce, upon re-stimulation, neutrophil chemokines. Using a multitude of approaches, we reveal that the priming, but not maintenance, of memory AM requires the help from effector CD8 T cells. T cells jump-start this process in AM via IFN-γ production. We further find that formation/maintenance of memory AM are independent of monocytes or bone marrow progenitors. Finally, we demonstrate that memory AM are poised for robust trained immunity against bacterial infection in the lung via rapid induction of chemokines and neutrophilia. Our study thus establishes a new paradigm of immunological memory formation whereby adaptive T-lymphocytes render innate memory of mucosal-associated macrophages.
 
Overall design Acute respiratory viral infection was elicited by intranasal inoculation with a recombinant human serotype 5 adenovirus expressing an Mtb protein Ag85A at 5×107 PFU per mouse. PBS inoculated mice were used as control. At 4 weeks post infection, CD11b-CD11c+ alveolar macrophages (AM) were purified from bronchoalveolar lavage fluid by using magnetic selection. AM from each 3 mice were pooled and used as one sample and triplicate samples/group were set up for RNA extraction and gene microarray analysis. Quality of RNA and subsequent microarray was carried out by the Center for Applied Genomics of The Hospital for Sick Children (Toronto, ON). The quality of RNA samples was analyzed using the Agilent 2100 bioanalyzer, which uses RNA 6000 Nano LabChip platform (Agilent Technologies Canada, Mississauga, ON). RNA samples were then subjected to RNA microarray expression analysis using the Affymetrix Mouse Gene 2.0 ST array. This array contains protein-coding regions.
Web link https://doi.org/10.1016/j.cell.2018.09.042
 
Contributor(s) Yao Y, Jeyanathan M, Haddadi S, Barra NG, Vaseghi-Shanjani M, Damjanovic D, Lai R, Afkhami S, Chen Y, Dvorkin-Gheva A, Robbins CS, Schertzer JD, Xing Z
Citation(s) 30433869, 36456739
Submission date Aug 14, 2018
Last update date Jan 06, 2023
Contact name Zhou Xing
E-mail(s) xingz@mcmaster.ca
Organization name McMaster University
Department Pathology and Molecular Medicine
Lab MDCL-4084
Street address 1280 Main Street West
City Hamilton
State/province Ontario
ZIP/Postal code L8S4K1
Country Canada
 
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (6)
GSM3331335 Alveolar macrophages d28 post Ad infection rep1
GSM3331336 Alveolar macrophages d28 post Ad infection rep2
GSM3331337 Alveolar macrophages d28 post Ad infection rep3
Relations
BioProject PRJNA485891

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Supplementary file Size Download File type/resource
GSE118512_RAW.tar 54.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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