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Series GSE117781 Query DataSets for GSE117781
Status Public on Mar 10, 2020
Title Cellular origin, tumour progression and pathogenic mechanisms of cutaneous neurofibromas revealed by mice with Nf1 knockout in boundary cap cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Patients carrying an inactive NF1 allele develop tumours of Schwann cell origin called neurofibromas (NFs). Genetically engineered mouse models have significantly enriched our understanding of plexiform forms of NFs (pNFs). However, this has not been the case for cutaneous neurofibromas (cNFs), observed in all NF1 patients, as no previous model recapitulates their development. Here, we show that conditional Nf1 inactivation in Prss56-positive boundary cap cells leads to bona fide pNFs and cNFs. This work identifies subepidermal glia as a likely candidate for the cellular origin of cNFs, and provides insights on disease mechanisms, revealing a long, multistep pathological process in which inflammation play pivotal role. This new mouse model is an important asset for future clinical and therapeutic investigations of NF1-associated neurofibromas.
 
Overall design Comparaison between injured (14 days post-injury) versus uninjured skin isolated from Nf1-KO and control mice
 
Contributor(s) Radomska KJ, Coulpier F, Gresset A, Schmitt A, Debbiche A, Lemoine S, Wolkenstein P, Vallat J, Charnay P, Topilko P
Citation(s) 30348676
Submission date Jul 27, 2018
Last update date Mar 10, 2020
Contact name Stephane Le Crom
Organization name IBENS
Department Genomic Core Facility
Street address 46 rue Ulm
City PARIS
ZIP/Postal code 75230
Country France
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (12)
GSM3308672 CTRL uninjured rep1
GSM3308673 CTRL uninjured rep2
GSM3308674 CTRL uninjured rep3
Relations
BioProject PRJNA483185
SRA SRP155510

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE117781_RAW.tar 3.9 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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